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sib-swiss / training-collection

  • среда, 24 августа 2022 г. в 00:34:59
https://github.com/sib-swiss/training-collection


Collection of bioinformatics training materials



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Bioinformatics training materials

A curated list of bioinformatics training material. All material is:

  • In a GitHub or GitLab repository
  • Free to use
  • Written in markdown or similar

NOTE: This list of courses is selected only based on the above criteria. There are no checks on quality.

Is your (favourite) course not in there? Is a link dead? Did you find a typo? Any contribution to this list is highly appreciated 👍. Please have a look at CONTRIBUTING.md first.

Contents

Scripting and languages

UNIX shell

Python

R

git

Sequence data analysis

General

Miscellaneous

RNA-seq

ChIP-seq

Single cell

Variant analysis

Genome assembly

Metagenomics

Computational methods and pipelines

Containers

Nextflow

Snakemake

Galaxy

CWL

High performance computing

Statistics and machine learning

Statistics

Machine learning

Reproducibility and data management

Reproducibility

Data management

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